Blog Posts | Joshua Berkowitz

8 Articles

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AI Breakthrough: Designing Living Phage Genomes from Scratch

Artificial intelligence has taken a bold leap from designing individual proteins to creating entire viral genomes that function in the real world. Researchers at the Arc Institute and Stanford have ac...

artificial intelligence bacteriophages bioengineering biosecurity biotechnology genome design phage research synthetic biology

Sep 17, 2025

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Cell Memory: Cells Remember in Shades, Not Just Black and White

Recent research from MIT is challenging the conventional wisdom about epigenetic memory, suggesting that cells can maintain a wide range of gene expression levels over time. This discovery moves us be...

biological engineering cell identity DNA methylation epigenetics gene expression synthetic biology tissue engineering

Sep 12, 2025

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AI-Designed Drugs Break Through Barriers in Cancer and Alzheimer’s Treatment

Researchers are now leveraging AI to design drugs that target the so-called “undruggable” proteins, unstable, shifting molecules that have evaded traditional therapies for decades. Why Protein Shape M...

AI drug design Alzheimer's research biotechnology cancer therapy intrinsically disordered proteins medical innovation protein binders synthetic biology

Aug 13, 2025

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AI Powered CRISPR: The Next Generation of Gene Editing Tools

Gene editing has relied on tools discovered in nature, but a new wave of innovation is changing how we create proteins by harnessing artificial intelligence. Scientists can now design custom CRISPR sy...

artificial intelligence CRISPR gene editing genome engineering immunogenicity precision medicine protein design synthetic biology

Aug 8, 2025

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Papers

Turning Plastic Waste into Medicine: Biocompatible Chemistry Breakthrough in E. coli

What if plastic waste didn't end up in landfills or oceans but instead becomes the starting point for life-saving medicines. Researchers researchers are working towards this reality by integrating the...

biocompatible chemistry E. coli Lossen rearrangement metabolic engineering paracetamol biosynthesis plastic upcycling sustainable manufacturing synthetic biology

Jun 27, 2025

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AlphaGenome: Ushering in a New Era of Genomic Insight with AI

Google DeepMind’s AlphaGenome can read the complex code of your DNA, unlocking secrets that determine health, disease risk, and the subtle mechanisms that make us unique, offering scientists a powerfu...

AI in biology DeepMind disease research gene regulation genomics synthetic biology variant prediction

Jun 25, 2025

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RNA’s Hidden Structural Powers Are Changing Molecular Biology

For decades, RNA has been seen primarily as a messenger—carrying genetic instructions between DNA and the machinery that makes proteins. But recent research has upended this view, revealing that RNA i...

biotechnology cryo-EM molecular biology RNA SLAC Stanford synthetic biology

May 31, 2025

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Rutgers Scientists Are Turning Living Cells into Smart Biosensors

Envision a future where your own cells can alert doctors to early signs of disease or exposure to environmental toxins—all by using the natural molecules already inside them. This is no longer just sc...

biosensors cellular engineering disease detection environmental monitoring RNA technology Rutgers research synthetic biology

May 20, 2025

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